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Bergam0t/README.md

Hi there - I'm Sammi! 🚡 🏸 🎷 πŸ‘©β€πŸ’»

I'm currently a trainer on the Health Service Modelling Associates Programme.

I was previously a data analyst, and later data scientist, in a mental health trust in the NHS.

I completed my BA in Biological Sciences at the University of Oxford in 2011-14, and my MSc in Health Data Science at the University of Exeter in 2020-21, with a focus on web app development for healthcare service improvement.

I'm currently working on

Favourite things to work with

My current favourite things to work with are

Chat with me!

I'd love to chat about

  • how to use routinely collected data better to improve mental healthcare services
  • how to make it easier for analysts and data scientists to securely deploy custom web apps in their organisations
  • improving data literacy in the NHS and helping stakeholders understand the amazing potential of R, Python, advanced analytics, operational research and data science
  • how to teach coding, data science and operational research effectively

Sammi's GitHub stats

Other Projects

Here are a couple of other things I've created!

Health and Social Care Service Use Timelines (Theographs/Pearn Charts) for PowerBI

This custom PowerBI visual takes a simple, routinely collected dataset of patient history and displays it in a clear format.

Long-term referrals as well as individual interactions with services can be shown, with customisable tooltips, allowing clinicians to get an overview of a patient's history in a quick glance and spot repeated patterns of service interaction. Designed initially for use in mental health services, where clients can have more than a decade of data, thousands of contacts, and systems which display these details as rows of text rather than in a way that allows easy interpretation.

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A second visual is designed specifically for non-overlapping data, such as ward stays.

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SPC charts for PowerBI (based on code from the NHSRPlotTheDots project)

This custom PowerBI visual allows SPC charts to be created within PowerBI that automatically adhere to the making data count guidance.

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Extensive customisation is available through built-in menus. Multiple output types are possible, including faceted graphs, metric cards, and several summary tables.

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  1. hsma-programme/Teaching_DES_Concepts_Streamlit hsma-programme/Teaching_DES_Concepts_Streamlit Public

    A streamlit app (running from github pages using the stlite package) for teaching concepts of discrete event simulation, including animated entity flow plots created in Plotly

    Python 13 5

  2. community_service_timelines community_service_timelines Public

    PowerBI version of the Theograph (aka Pearn Chart or service use timeline) for visualising patient interactions with healthcare services

    HTML 1

  3. hsma-programme/hsma6_des_book hsma-programme/hsma6_des_book Public

    A book summarising the content of the DES module in the HSMA programme and covering additional concepts that wouldn't fit in the course

    HTML 8 4

  4. hsma-tools/vidigi hsma-tools/vidigi Public

    Package for creating simple animated visualisations of entity flow in simulation models and from historical data

    HTML 15 3

  5. hsma-tools/stlitepack hsma-tools/stlitepack Public

    A small package to simplify converting standard Streamlit apps to stlite (browser-based, pyodide) apps

    HTML 1

  6. hsma-programme/decision_intelligence_atlas hsma-programme/decision_intelligence_atlas Public

    Directory of open-source tools, packages, and projects for analytics and decision science in healthcare.

    JavaScript 3 1