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@Breeding-Insight

Breeding Insight

Combining genomics and informatics to accelerate genetic gains.

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  1. bi-web bi-web Public

    TypeScript 7 1

  2. bi-api bi-api Public

    Java 8 1

  3. brapi brapi Public

    A java project with modules to interact with BrAPI data.

    Java 4 1

  4. bi-docker-stack bi-docker-stack Public

    Shell 3

Repositories

Showing 10 of 58 repositories
  • bi-api Public
    Breeding-Insight/bi-api’s past year of commit activity
    Java 8 Apache-2.0 1 0 15 Updated Feb 9, 2026
  • BIGapp Public

    The BIG app is a user-friendly R Shiny app to analyze genomic data without needing to use command-line tools and works across different species ploidy.

    Breeding-Insight/BIGapp’s past year of commit activity
    R 5 Apache-2.0 7 1 2 Updated Feb 9, 2026
  • bi-docker-stack Public
    Breeding-Insight/bi-docker-stack’s past year of commit activity
    Shell 3 0 0 0 Updated Feb 7, 2026
  • brapi Public

    A java project with modules to interact with BrAPI data.

    Breeding-Insight/brapi’s past year of commit activity
    Java 4 Apache-2.0 1 2 5 Updated Feb 6, 2026
  • nemaquant Public
    Breeding-Insight/nemaquant’s past year of commit activity
    JavaScript 0 Apache-2.0 0 0 0 Updated Feb 6, 2026
  • sorghum_validate_panel Public

    This repository contains a complete computational workflow for comparing genomic selection (GS) performance between whole-genome sequencing (WGS) and AgriPlex genotyping platforms in the Sorghum Association Panel (SAP).

    Breeding-Insight/sorghum_validate_panel’s past year of commit activity
    R 0 0 0 0 Updated Feb 6, 2026
  • bi-web Public
    Breeding-Insight/bi-web’s past year of commit activity
    TypeScript 7 Apache-2.0 1 0 22 Updated Feb 4, 2026
  • Alfalfa_genomic_prediction_paper Public
    Breeding-Insight/Alfalfa_genomic_prediction_paper’s past year of commit activity
    R 0 0 0 0 Updated Feb 2, 2026
  • BI_Genotype_IDs_Generator Public

    ShinyApp to generate sample tracking files needed for BI-DArT workflow

    Breeding-Insight/BI_Genotype_IDs_Generator’s past year of commit activity
    R 0 0 0 0 Updated Jan 29, 2026
  • BIGr Public

    This R package contains the functions developed within Breeding Insight to analyze diploid and polyploid breeding and genetic data

    Breeding-Insight/BIGr’s past year of commit activity
    R 3 Apache-2.0 4 0 2 Updated Jan 22, 2026
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