feat: migrate from PDM to uv package manager

.github/workflows/copilot-setup-steps.yml

@@ -57,29 +57,21 @@ jobs:
         uses: actions/checkout@v4
 
       - name: Install uv
-        uses: astral-sh/setup-uv@v5
+        uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86 # v5
         with:
           pyproject-file: "extralit-server/pyproject.toml"
           python-version: "3.11"
           enable-cache: true
           cache-local-path: ~/.cache/uv
-          cache-dependency-glob: "extralit-server/pdm.lock"
+          cache-dependency-glob: "extralit-server/uv.lock"
 
-      - name: Setup Python env and Install extralit-server editable package
-        env:
-          PDM_IGNORE_ACTIVE_VENV: 1
-        run: |
-          uv tool install pdm
-          pdm config use_uv true
-          pdm config python.install_root "$(uv python dir)"
-
-          cd extralit-server/
-          pdm install -G test
+      - name: Setup Python env and Install extralit-server
+        working-directory: extralit-server
+        run: uv sync --group test --extra postgresql
 
       - name: Install extralit editable package with dependencies
         working-directory: extralit
-        run: |
-          uv pip install -e ".[dev]"
+        run: uv sync
 
       - name: Install Node.js
         uses: actions/setup-node@v4
@@ -101,8 +93,8 @@ jobs:
           HOME: /home/runner
         run: |
           mkdir -p /home/runner/.extralit
-          pdm run alembic -c src/extralit_server/alembic.ini upgrade head
+          uv run alembic -c src/extralit_server/alembic.ini upgrade head
 
     #   - name: Verify critical dependencies
     #     run: |
-    #       cd extralit-server && pdm run python -c "import pandera; print('✓ Pandera available')" || echo "⚠ Pandera not available"
+    #       cd extralit-server && uv run python -c "import pandera; print('✓ Pandera available')" || echo "⚠ Pandera not available"

.github/workflows/extralit-server.build-docker-images.yml

@@ -21,19 +21,15 @@ jobs:
     steps:
       - uses: actions/checkout@v4
 
-      - name: Setup PDM
-        uses: pdm-project/setup-pdm@v4
-        with:
-          python-version-file: extralit-server/pyproject.toml
-          cache-dependency-path: extralit-server/pdm.lock
-          cache: true
+      - name: Install uv
+        uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86
 
       - name: Read package info
         id: package-info
         working-directory: extralit-server
         run: |
-          PACKAGE_VERSION=$(pdm show --version)
-          PACKAGE_NAME=$(pdm show --name)
+          PACKAGE_VERSION=$(grep '__version__' src/extralit_server/_version.py | cut -d'"' -f2)
+          PACKAGE_NAME="extralit-server"
           echo "PACKAGE_NAME=$PACKAGE_NAME" >> $GITHUB_OUTPUT
           echo "PACKAGE_VERSION=$PACKAGE_VERSION" >> $GITHUB_OUTPUT
           echo "$PACKAGE_NAME==$PACKAGE_VERSION"
@@ -130,4 +126,3 @@ jobs:
           password: ${{ env.DOCKER_PASSWORD }}
           repository: ${{ env.SERVER_DOCKER_IMAGE }}
           readme-filepath: extralit-server/docker/server/README.md
-

.github/workflows/extralit-server.yml

@@ -91,32 +91,26 @@ jobs:
         uses: actions/checkout@v4
 
       - name: Install uv
-        uses: astral-sh/setup-uv@v5
+        uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86
         with:
           pyproject-file: "extralit-server/pyproject.toml"
           enable-cache: true
           cache-local-path: ~/.cache/uv
-          cache-dependency-glob: "extralit-server/pdm.lock"
-
-      - name: Install PDM
-        run: uv tool install pdm
+          cache-dependency-glob: "extralit-server/uv.lock"
 
       - name: Install dependencies
-        run: |
-          pdm config use_uv true
-          pdm config python.install_root "$(uv python dir)"
-          pdm install --dev
+        run: uv sync --group test --extra postgresql
 
       - name: Run tests 📈
         id: run-tests
         continue-on-error: true
         env:
           HF_TOKEN_EXTRALIT_INTERNAL_TESTING: ${{ secrets.HF_TOKEN_EXTRALIT_INTERNAL_TESTING }}
+          EXTRALIT_DATABASE_URL: postgresql://postgres:postgres@localhost:5432/extralit
+          EXTRALIT_ELASTICSEARCH: http://localhost:9200
+          EXTRALIT_SEARCH_ENGINE: elasticsearch
         run: |
-          EXTRALIT_DATABASE_URL=postgresql://postgres:postgres@localhost:5432/extralit
-          EXTRALIT_ELASTICSEARCH=http://localhost:9200
-          EXTRALIT_SEARCH_ENGINE=elasticsearch
-          pdm test-cov tests/unit
+          uv run pytest tests/unit --cov=extralit_server --cov-report=term --cov-report=xml --verbosity=0 --disable-warnings
 
       - name: Upload test coverage
         if: always()
@@ -156,7 +150,7 @@ jobs:
       - name: Build package
         run: |
           cp -r ../extralit-frontend/dist src/extralit_server/static
-          pdm build
+          uv build
 
       - name: Upload artifact
         uses: actions/upload-artifact@v4
@@ -209,7 +203,7 @@ jobs:
         uses: githubocto/repo-visualizer@0.7.1
         with:
           root_path: "extralit-server/"
-          excluded_paths: "dist,build,node_modules,docs,tests,.swm,assets,.github,package-lock.json,pdm.lock"
+          excluded_paths: "dist,build,node_modules,docs,tests,.swm,assets,.github,package-lock.json,uv.lock"
           excluded_globs: "*.spec.js;**/*.{png,jpg,svg,md};**/!(*.module).ts,**/__pycache__/,**/__mocks__/,LICENSE*,**/.gitignore,**/*.egg-info/,**/.*/"
           output_file: "repo-visualizer.svg"
           should_push: false
@@ -227,25 +221,23 @@ jobs:
           name: extralit-server
           path: extralit-server/dist
 
-      - name: Setup PDM
-        uses: pdm-project/setup-pdm@v4
+      - name: Install uv
+        uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86
         with:
-          python-version-file: extralit-server/pyproject.toml
-          cache-dependency-path: extralit-server/pdm.lock
-          cache: true
+          pyproject-file: "extralit-server/pyproject.toml"
 
       - name: Read package info
         run: |
-          PACKAGE_VERSION=$(pdm show --version)
-          PACKAGE_NAME=$(pdm show --name)
+          PACKAGE_VERSION=$(grep '__version__' src/extralit_server/_version.py | cut -d'"' -f2)
+          PACKAGE_NAME="extralit-server"
           echo "PACKAGE_VERSION=$PACKAGE_VERSION" >> $GITHUB_ENV
           echo "PACKAGE_NAME=$PACKAGE_NAME" >> $GITHUB_ENV
           echo "$PACKAGE_NAME==$PACKAGE_VERSION"
 
       - name: Publish Package to PyPI test environment 🥪
         continue-on-error: true
         run: |
-          pdm publish --no-build --repository testpypi --username __token__ --password ${{ secrets.AR_TEST_PYPI_API_TOKEN }}
+          uv publish --index-url https://test.pypi.org/legacy/ --token ${{ secrets.AR_TEST_PYPI_API_TOKEN }} dist/*
 
       - name: Test Installing 🍿
         continue-on-error: true
@@ -255,4 +247,4 @@ jobs:
       - name: Publish Package to PyPI 🥩
         if: github.ref == 'refs/heads/main'
         run: |
-          pdm publish --no-build --username __token__ --password ${{ secrets.AR_PYPI_API_TOKEN }}
+          uv publish --token ${{ secrets.AR_PYPI_API_TOKEN }} dist/*

.github/workflows/extralit.docs.yml

@@ -43,30 +43,18 @@ jobs:
       - uses: actions/checkout@v4
 
       - name: Install uv
-        uses: astral-sh/setup-uv@v5
+        uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86
         with:
           pyproject-file: "extralit/pyproject.toml"
           python-version: "3.10"
           enable-cache: true
           cache-local-path: ~/.cache/uv
           ignore-nothing-to-cache: true
-          cache-dependency-glob: "extralit/pdm.lock"
-
-      - name: Setup PDM
-        uses: pdm-project/setup-pdm@v4
-        with:
-          python-version: "3.10"
-          cache: true
-          cache-dependency-path: |
-            extralit/pdm.lock
+          cache-dependency-glob: "extralit/uv.lock"
 
       - name: Install dependencies
-        env:
-          PDM_IGNORE_ACTIVE_VENV: 1
         run: |
-          pdm config use_uv true
-          pdm config python.install_root "$(uv python dir)"
-          pdm install -q
+          uv sync
           uv cache prune --ci
 
       - name: Set git credentials
@@ -80,33 +68,33 @@ jobs:
 
       - name: Deploy Extralit docs (branch /main)
         run: |
-          pdm run mike deploy stable --push
+          uv run mike deploy stable --push
         if: github.ref == 'refs/heads/main'
 
       - name: Deploy Extralit docs (branch /develop)
         run: |
-          pdm run mike deploy latest --push
-          pdm run mike set-default --push latest
+          uv run mike deploy latest --push
+          uv run mike set-default --push latest
         if: github.ref == 'refs/heads/develop' || github.event_name == 'workflow_dispatch'
 
       - name: Deploy Extralit docs (release $version)
         run: |
           version=$(echo $TAG_VERSION | awk -F \. {'print $1"."$2'})
           echo "Deploying version ${version}"
-          pdm run mike deploy $version --push
+          uv run mike deploy $version --push
         if: startsWith(github.ref, 'refs/tags/')
         env:
           TAG_VERSION: ${{ github.ref_name }}
 
       - name: Delete Extralit docs (versions 'docs_*')
         id: delete_deployment
         run: |
-          versions=$(pdm run mike list)
+          versions=$(uv run mike list)
           formatted_versions=$(echo "$versions" | tr ',' '\n' | tr -d '[]')
           for version in $versions; do
             if [[ $version == docs_* ]]; then
               echo "Deleting version: $version"
-              pdm run mike delete "$version" --push
+              uv run mike delete "$version" --push
             fi
           done
         if: startsWith(github.ref, 'refs/tags/')
@@ -117,7 +105,7 @@ jobs:
         run: echo "branch_name=${GITHUB_HEAD_REF:-${GITHUB_REF#refs/heads/}}" | sed 's/\//_/g'  >> $GITHUB_OUTPUT
 
       - name: Deploy Extralit docs (branch /docs/*)
-        run: pdm run mike deploy ${{ steps.extract_branch_name.outputs.branch_name }} --prop-set hidden=true --push
+        run: uv run mike deploy ${{ steps.extract_branch_name.outputs.branch_name }} --prop-set hidden=true --push
         if: startsWith(github.ref, 'refs/heads/docs') || startsWith(github.head_ref, 'docs/')
 
       - name: Add deployment message in PR

.github/workflows/extralit.yml

@@ -50,24 +50,17 @@ jobs:
     steps:
       - uses: actions/checkout@v4
       - name: Install uv
-        uses: astral-sh/setup-uv@v5
+        uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86
         with:
           pyproject-file: "extralit/pyproject.toml"
           python-version: ${{ matrix.python-version }}
           enable-cache: true
           cache-local-path: ~/.cache/uv
           ignore-nothing-to-cache: true
-          cache-dependency-glob: "extralit/pdm.lock"
-      - name: Install PDM
-        run: uv tool install pdm
+          cache-dependency-glob: "extralit/uv.lock"
       - name: Install dependencies
-        env:
-          PDM_IGNORE_ACTIVE_VENV: 1
         run: |
-          pdm config use_uv true
-          pdm config python.install_root "$(uv python dir)"
-
-          pdm install
+          uv sync
           uv cache prune --ci
       - name: Wait for extralit-container to start
         timeout-minutes: 3
@@ -89,8 +82,11 @@ jobs:
       - name: Run unit tests
         id: tests-unit
         continue-on-error: true
+        env:
+          EXTRALIT_API_URL: http://localhost:6900
+          EXTRALIT_API_KEY: extralit.apikey
         run: |
-            pdm run test-cov tests/unit
+          uv run pytest tests/unit --disable-warnings --cov=extralit --cov-report=term --cov-report=xml
 
       - name: Check test status
         if: steps.tests-unit.outcome == 'failure'
@@ -99,15 +95,18 @@ jobs:
       - name: Run integration tests
         id: tests-integration
         continue-on-error: true
+        env:
+          EXTRALIT_API_URL: http://localhost:6900
+          EXTRALIT_API_KEY: extralit.apikey
         run: |
-            pdm run test-cov tests/integration
+          uv run pytest tests/integration --disable-warnings --cov=extralit --cov-report=term --cov-report=xml --cov-append
 
       - name: Generate coverage report
         if: always()
         continue-on-error: true
         run: |
-          pdm run coverage xml -o coverage.xml
-          pdm run coverage report
+          uv run coverage xml -o coverage.xml
+          uv run coverage report
 
       - name: Upload test coverage
         if: always()
@@ -124,7 +123,7 @@ jobs:
 
       - name: Build package
         run: |
-          pdm build
+          uv build
       - name: Upload artifact
         uses: actions/upload-artifact@v4
         # Upload the package to be used in the next jobs only once
@@ -161,7 +160,7 @@ jobs:
         uses: githubocto/repo-visualizer@0.7.1
         with:
           root_path: "extralit/"
-          excluded_paths: "dist,build,node_modules,docs,tests,.swm,assets,.github,package-lock.json,pdm.lock"
+          excluded_paths: "dist,build,node_modules,docs,tests,.swm,assets,.github,package-lock.json,uv.lock"
           excluded_globs: "*.spec.js;**/*.{png,jpg,svg,md};**/!(*.module).ts,**/__pycache__/,**/__mocks__/,LICENSE*,**/.gitignore,**/*.egg-info/,**/.*/"
           output_file: "repo-visualizer.svg"
           should_push: false
@@ -180,28 +179,23 @@ jobs:
           path: extralit/dist
 
       - name: Install uv
-        uses: astral-sh/setup-uv@v5
+        uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86
         with:
           pyproject-file: "extralit/pyproject.toml"
           python-version: "3.9"
-          enable-cache: true
-          cache-local-path: ~/.cache/uv
-          ignore-nothing-to-cache: true
-          cache-dependency-glob: "extralit/pdm.lock"
-      - name: Install PDM
-        run: uv tool install pdm
 
       - name: Read package info
         run: |
-          PACKAGE_VERSION=$(pdm show --version)
-          PACKAGE_NAME=$(pdm show --name)
+          PACKAGE_VERSION=$(grep '__version__' src/extralit/_version.py | cut -d'"' -f2)
+          PACKAGE_NAME="extralit"
           echo "PACKAGE_VERSION=$PACKAGE_VERSION" >> $GITHUB_ENV
           echo "PACKAGE_NAME=$PACKAGE_NAME" >> $GITHUB_ENV
           echo "$PACKAGE_NAME==$PACKAGE_VERSION"
 
       - name: Publish Package to PyPI test environment 🥪
-        run: pdm publish --no-build --repository testpypi --username __token__ --password ${{ secrets.AR_TEST_PYPI_API_TOKEN }}
         continue-on-error: true
+        run: |
+          uv publish --index-url https://test.pypi.org/legacy/ --token ${{ secrets.AR_TEST_PYPI_API_TOKEN }} dist/*
 
       - name: Test Installing 🍿
         continue-on-error: true
@@ -210,4 +204,5 @@ jobs:
 
       - name: Publish Package to PyPI 🥩
         if: github.ref == 'refs/heads/main'
-        run: pdm publish --no-build --username __token__ --password ${{ secrets.AR_PYPI_API_TOKEN }}
+        run: |
+          uv publish --token ${{ secrets.AR_PYPI_API_TOKEN }} dist/*

.gitignore

@@ -142,7 +142,6 @@ sw.*
 yarn.lock
 
 # pdm and uv
-uv.lock
 pyproject.toml.*
 
 # App generated files