Name	Name	Last commit message	Last commit date
Latest commit History 58 Commits
add_taxa	add_taxa
adjust_seq_orientation	adjust_seq_orientation
alpha_diversity	alpha_diversity
alpha_rarefaction	alpha_rarefaction
beta_diversity	beta_diversity
beta_diversity_through_plots	beta_diversity_through_plots
beta_significance	beta_significance
compare_taxa_summaries	compare_taxa_summaries
compute_core_microbiome	compute_core_microbiome
conditional_uncovered_probability	conditional_uncovered_probability
convert_otu_table_to_unifrac_sample_mapping	convert_otu_table_to_unifrac_sample_mapping
convert_unifrac_sample_mapping_to_otu_table	convert_unifrac_sample_mapping_to_otu_table
core_qiime_analyses	core_qiime_analyses
filter_fasta	filter_fasta
filter_otus_from_otu_table	filter_otus_from_otu_table
filter_samples_from_otu_table	filter_samples_from_otu_table
jackknifed_beta_diversity	jackknifed_beta_diversity
make_distance_boxplots	make_distance_boxplots
make_distance_comparison_plots	make_distance_comparison_plots
make_otu_heatmap_html	make_otu_heatmap_html
make_otu_network	make_otu_network
make_otu_table	make_otu_table
make_tep	make_tep
map_reads_to_reference	map_reads_to_reference
merge_otu_tables	merge_otu_tables
multiple_rarefactions	multiple_rarefactions
multiple_rarefactions_even_depth	multiple_rarefactions_even_depth
otu_category_significance	otu_category_significance
parallel_align_seqs_pynast	parallel_align_seqs_pynast
parallel_alpha_diversity	parallel_alpha_diversity
parallel_assign_taxonomy_blast	parallel_assign_taxonomy_blast
parallel_assign_taxonomy_rdp	parallel_assign_taxonomy_rdp
parallel_beta_diversity	parallel_beta_diversity
parallel_blast	parallel_blast
parallel_identify_chimeric_seqs	parallel_identify_chimeric_seqs
parallel_map_reads_to_reference	parallel_map_reads_to_reference
parallel_multiple_rarefactions	parallel_multiple_rarefactions
parallel_pick_otus_blast	parallel_pick_otus_blast
parallel_pick_otus_trie	parallel_pick_otus_trie
parallel_pick_otus_uclust_ref	parallel_pick_otus_uclust_ref
per_library_stats	per_library_stats
pick_otus_through_otu_table	pick_otus_through_otu_table
pick_reference_otus_through_otu_table	pick_reference_otus_through_otu_table
pick_subsampled_reference_otus_through_otu_table	pick_subsampled_reference_otus_through_otu_table
plot_rank_abundance_graph	plot_rank_abundance_graph
shared_phylotypes	shared_phylotypes
simsam	simsam
single_rarefaction	single_rarefaction
sort_otu_table	sort_otu_table
split_libraries_fastq	split_libraries_fastq
split_otu_table	split_otu_table
split_otu_table_by_taxonomy	split_otu_table_by_taxonomy
start_parallel_jobs	start_parallel_jobs
summarize_otu_by_cat	summarize_otu_by_cat
summarize_taxa	summarize_taxa
summarize_taxa_through_plots	summarize_taxa_through_plots
supervised_learning	supervised_learning
transform_coordinate_matrices	transform_coordinate_matrices
trflp_file_to_otu_table	trflp_file_to_otu_table
README.md	README.md
script_usage_tests.py	script_usage_tests.py

Name

Last commit message

Last commit date

58 Commits

add_taxa

adjust_seq_orientation

alpha_diversity

alpha_rarefaction

beta_diversity

beta_diversity_through_plots

beta_significance

compare_taxa_summaries