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chore(bigframes): add specific build script for doctest to restrict execution #16711
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,49 @@ | ||
| #!/bin/bash | ||
| set -eo pipefail | ||
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| # Disable buffering, so that the logs stream through. | ||
| export PYTHONUNBUFFERED=1 | ||
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| # Assume we are running from the repo root or we need to find it. | ||
| # If this script is in packages/bigframes/scripts/run_doctest.sh, | ||
| # then repo root is 3 levels up. | ||
| export PROJECT_ROOT=$(realpath "$(dirname "${BASH_SOURCE[0]}")/../../..") | ||
| cd "$PROJECT_ROOT" | ||
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| git config --global --add safe.directory "$(realpath .)" | ||
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| package_name="bigframes" | ||
| package_path="packages/${package_name}" | ||
| files_to_check="${package_path}" | ||
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| # Use the IF block to handle the case where KOKORO vars are missing | ||
| # (e.g. local testing) | ||
| if [[ -n "${KOKORO_GITHUB_PULL_REQUEST_TARGET_BRANCH}" && -n "${KOKORO_GITHUB_PULL_REQUEST_COMMIT}" ]]; then | ||
| echo "checking changes with 'git diff ${KOKORO_GITHUB_PULL_REQUEST_TARGET_BRANCH}...${KOKORO_GITHUB_PULL_REQUEST_COMMIT} -- ${files_to_check}'" | ||
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| package_modified=$(git diff "${KOKORO_GITHUB_PULL_REQUEST_TARGET_BRANCH}...${KOKORO_GITHUB_PULL_REQUEST_COMMIT}" -- "${files_to_check}" | wc -l) | ||
| else | ||
| # If not a PR (like a local run or a different CI trigger), | ||
| # we treat it as 0 so it falls through to the "continuous" check. | ||
| package_modified=0 | ||
| fi | ||
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| # Check if modified OR if it's a continuous build | ||
| if [[ "${package_modified}" -gt 0 || "$KOKORO_BUILD_ARTIFACTS_SUBDIR" == *"continuous"* ]]; then | ||
| echo "------------------------------------------------------------" | ||
| echo "Running doctest for: ${package_name}" | ||
| echo "------------------------------------------------------------" | ||
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| # Ensure credentials are set for system tests in Kokoro | ||
| if [[ -z "${GOOGLE_APPLICATION_CREDENTIALS}" && -f "${KOKORO_GFILE_DIR}/service-account.json" ]]; then | ||
| export GOOGLE_APPLICATION_CREDENTIALS="${KOKORO_GFILE_DIR}/service-account.json" | ||
| fi | ||
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| export GOOGLE_CLOUD_PROJECT="bigframes-testing" | ||
| NOX_SESSION=("cleanup" "doctest") | ||
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| cd "${package_path}" | ||
| python3 -m nox -s "${NOX_SESSION[@]}" | ||
| else | ||
| echo "No changes in ${package_name} and not a continuous build, skipping." | ||
| fi |
| Original file line number | Diff line number | Diff line change |
|---|---|---|
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@@ -12,6 +12,8 @@ | |
| # See the License for the specific language governing permissions and | ||
| # limitations under the License. | ||
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| import json | ||
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| import geopandas as gpd # type: ignore | ||
| import pandas as pd | ||
| import pyarrow as pa | ||
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@@ -396,8 +398,8 @@ def test_to_json_from_int(): | |
| def test_to_json_from_struct(): | ||
| s = bpd.Series( | ||
| [ | ||
| {"version": 1, "project": "pandas"}, | ||
| {"version": 2, "project": "numpy"}, | ||
| {"project": "pandas", "version": 1}, | ||
| {"project": "numpy", "version": 2}, | ||
|
Contributor
Author
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. The changes in this file help avoid test failures in non-deterministic result generation.
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Same here. It should be fixed by b/506201379 |
||
| ] | ||
| ) | ||
| assert dtypes.is_struct_like(s.dtype) | ||
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@@ -408,7 +410,9 @@ def test_to_json_from_struct(): | |
| dtype=dtypes.JSON_DTYPE, | ||
| ) | ||
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| pd.testing.assert_series_equal(actual.to_pandas(), expected.to_pandas()) | ||
| actual_json = [json.loads(x) for x in actual.to_pandas()] | ||
| expected_json = [json.loads(x) for x in expected.to_pandas()] | ||
| assert actual_json == expected_json | ||
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| def test_to_json_string_from_int(): | ||
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@@ -421,8 +425,8 @@ def test_to_json_string_from_int(): | |
| def test_to_json_string_from_struct(): | ||
| s = bpd.Series( | ||
| [ | ||
| {"version": 1, "project": "pandas"}, | ||
| {"version": 2, "project": "numpy"}, | ||
| {"project": "pandas", "version": 1}, | ||
| {"project": "numpy", "version": 2}, | ||
| ] | ||
| ) | ||
| assert dtypes.is_struct_like(s.dtype) | ||
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@@ -433,7 +437,9 @@ def test_to_json_string_from_struct(): | |
| dtype=dtypes.STRING_DTYPE, | ||
| ) | ||
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| pd.testing.assert_series_equal(actual.to_pandas(), expected.to_pandas()) | ||
| actual_json = [json.loads(x) for x in actual.to_pandas()] | ||
| expected_json = [json.loads(x) for x in expected.to_pandas()] | ||
| assert actual_json == expected_json | ||
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| def test_json_keys(): | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
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@@ -1234,7 +1234,7 @@ def test_divmods_series(scalars_dfs, col_x, col_y, method): | |
| # BigQuery's mod functions return NUMERIC values for non-INT64 inputs. | ||
| if bf_div_result.dtype == pd.Int64Dtype(): | ||
| bigframes.testing.utils.assert_series_equal( | ||
| pd_div_result, bf_div_result.to_pandas() | ||
| pd_div_result, bf_div_result.to_pandas(), check_dtype=False | ||
|
Contributor
Author
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. The changes in this file helps avoid test failures due to type checking.
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Is this a recent regression or mypy failure? Should we add a TODO with a link to a bug to follow up on it? |
||
| ) | ||
| else: | ||
| bigframes.testing.utils.assert_series_equal( | ||
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@@ -1279,7 +1279,7 @@ def test_divmods_scalars(scalars_dfs, col_x, other, method): | |
| # BigQuery's mod functions return NUMERIC values for non-INT64 inputs. | ||
| if bf_div_result.dtype == pd.Int64Dtype(): | ||
| bigframes.testing.utils.assert_series_equal( | ||
| pd_div_result, bf_div_result.to_pandas() | ||
| pd_div_result, bf_div_result.to_pandas(), check_dtype=False | ||
| ) | ||
| else: | ||
| bigframes.testing.utils.assert_series_equal( | ||
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Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
The non-deterministic nature of a number of tests and doctests was really brutal.
This change helps avoid test failures in non-deterministic result generation.
There was a problem hiding this comment.
Choose a reason for hiding this comment
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It should be a valid bug and assigned to myself b/506201379.