shappiron / Reprogramming_meta Public

This is a repository for code of reprogramming meta-analysis research project

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Name		Name	Last commit message	Last commit date
Latest commit History 27 Commits
Functions for signature aggregation		Functions for signature aggregation
gsea_results		gsea_results
plot_functions		plot_functions
post_functions		post_functions
signatures		signatures
subdata		subdata
ultrasets		ultrasets
utils		utils
.gitignore		.gitignore
Core.ipynb		Core.ipynb
GEO_R.ipynb		GEO_R.ipynb
GEO_py_RNA.ipynb		GEO_py_RNA.ipynb
README.md		README.md
Signatures_lists_aging_longevity.R		Signatures_lists_aging_longevity.R
aging_clock_alex.ipynb		aging_clock_alex.ipynb
aging_transcriptomes.ipynb		aging_transcriptomes.ipynb
bigsea.ipynb		bigsea.ipynb
clocks.ipynb		clocks.ipynb
clocks_data_preprocessing.ipynb		clocks_data_preprocessing.ipynb
clustering.ipynb		clustering.ipynb
cmap_parser.ipynb		cmap_parser.ipynb
dynamics.ipynb		dynamics.ipynb
enrichment.ipynb		enrichment.ipynb
limma_gracia.ipynb		limma_gracia.ipynb
main.ipynb		main.ipynb
normalization.ipynb		normalization.ipynb
only_plots.ipynb		only_plots.ipynb
preprocess_2.ipynb		preprocess_2.ipynb